Table 1 Haplotype analysis
A | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Family DOA | 139 | 141 | 142 | 143 | 144 | 145 | 146 | 147 | 148 | 140 | |
Affected | 1 | 7 | 3 | 2 | 6 | 6 | 11 | 2 | 3 | 3 | |
Unaffected | 1 | 2 | |||||||||
SNP | Position | ||||||||||
rs6796000 | 188,391,767 | T | T | T | T | T | T | T | T | T | T |
rs4677728 | 191,093,560 | A | A | A | G | A | A | A | A | A | T |
rs4453795 | 192,094,225 | A | A | A | A | A | A | A | G | A | T |
rs3905277 | 192,983,948 | A | A | A | A | A | A | A | A | A | T |
rs6788448 | 193,209,428 | C | C | C | C | C | C | C | C | C | TC |
rs11922359 | 193,290,262 | A | A | A | A | A | A | A | A | A | A |
rs9868128 | 193,299,458 | A | A | A | A | A | A | A | A | A | TA |
OPA1 | 193,310,933-193,415,599 | ||||||||||
rs1007408 | 193,475,519 | C | C | C | C | C | C | C | C | C | G |
rs11915891 | 193,488,257 | C | C | C | C | C | C | C | C | C | T |
rs6770515 | 193,490,499 | A | A | A | A | A | A | A | A | A | A |
rs9854346 | 193,492,100 | A | A | A | A | A | A | A | A | A | A |
rs9866505 | 193,676,362 | C | C | C | C | C | C | C | C | C | T |
rs4677655 | 194,826,387 | T | T | T | C | T | T | T | T | T | T |
rs3772109 | 196,005,479 | T | T | T | C | C | T | T | T | T | T |
B | |||||||||||
Family DOA | Position | 149 | 150 | 151 | 152 | 153 | 154 | 155 | 156 | 157 | 158 |
Affected | 5 | 2 | 3 | 6 | 2 | 1 | 5 | 3 | 1 | 1 | |
Unaffected | 2 | 1 | 1 | 3 | 2 | ||||||
SNP | Position | ||||||||||
rs6796000 | 188,391,767 | T | T | T | T | T | T:T | T | T | T:T | T:T |
rs4677728 | 191,093,560 | A | A | A | A | A | G:A | G | G | A:A | G:A |
rs4453795 | 192,094,225 | G | GA | A | A | A | A:A | G | G | G:A | A:A |
rs3905277 | 192,983,948 | A | G | G | G | G | G:G | G | A | G:A | A:A |
rs6788448 | 193,209,428 | T | TC | TC | C | C | C:C | T | T | T:C | T:C |
rs11922359 | 193,290,262 | A | A | A | A | A | A:A | T | T | A:A | A:A |
rs9868128 | 193,299,458 | A | A | A | A | A | A:A | T | T | A:A | A:A |
OPA1 | 193,310,933-193,415,599 | ||||||||||
rs1007408 | 193,475,519 | C | GC | GC | GC | G | G:C | GC | C | G:G | G:C |
rs11915891 | 193,488,257 | C | TC | T | T | TC | T:C | C | C | T:T | T:C |
rs6770515 | 193,490,499 | G | G | GC | G | GA | G:G | G | G | G:G | G:G |
rs9854346 | 193,492,100 | T | T | T | T | TA | T:T | T | T | T:T | T:T |
rs9866505 | 193,676,362 | C | TC | T | T | TC | T:C | C | C | T:T | T:C |
rs4677655 | 194,826,387 | TC | TC | TC | C | T | T:C | TC | T | T:T | T:C |
rs3772109 | 196,005,479 | T | TC | T | T | T | T:T | T | T | T:T | T:T |