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Table 4 Estimated haplotype frequencies and haplotype association with annual decline in FEV1

From: An interaction between Nrf2 polymorphisms and smoking status affects annual decline in FEV1: a longitudinal retrospective cohort study

Haplotype

rs2001350

rs6726395

rs1962142

rs2364722

rs6721961

Haplotype frequency

Haplotype-specific score

Simulation p value

Global simulation p value

1

T

A

A

A

T

0.082

-2.988

0.002

0.004

2

C

G

A

G

T

0.148

-1.319

0.182

 

3

T

A

G

A

G

0.561

0.453

0.663

 

4

T

A

A

A

G

0.077

1.184

0.235

 
  1. Haplotype frequencies were estimated using the Haplo. Stats program. Haplotype 1(rs2001350T/rs6726395A/rs1962142A/rs2364722A/rs6721961T) was associated with annual decline in FEV1 with a haplotype score of -2.988 and a simulation p value of 0.002. Haplotye with frequencies less than 0.05 were excluded.