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Table 1 Mutations in BRCA1 gene in Slovenian population.

From: The occurrence of germline BRCA1 and BRCA2sequence alterations in Slovenian population

BIC nomenclature*

HGVS nomenclature**

Protein change according to BIC database

Described in BIC database (No. of quotations in BIC)

Present in other than Slovenian population (No. of families) ***

No. of positive Slovenian families

235G > A

c.116G > A

C39Y

yes (4)

 

3

300T > G

c.181T > G

C61G

yes (202)

Germany (30), Italy (?), Czech rep (20), Austria (3), Slovakia (2)

15

300T > A

c.181T > A

C61S

no

 

4

310G > A

c.191G > A

C64Y

yes (20)

Germany (1), Czech rep (1), Canada (2)

1

576delAG

c.457_458delAG

157X

no

 

1

963-969 dup (969ins7)

c.844_850dupTCATTAC

288X

yes (2)

Germany (2)

8

962 del4

c.843_846delCTCA

297X

yes (17)

Germany (2), Italy (?), Czech rep (1), Austria (2), Slovakia (2), Canada (2- Slavic origin)

2

1806C > T

c.1687C > T

Q563X

yes (88)

Germany (5), Czech rep (6), Austria (2)

13

2388delG

c.2269delG

764X

yes (7)

 

1

3137delTTCA

c.3018_3021delTTCA

1022X

yes (2)

 

1

5296 del4 (GAAA)

c.5177_5180delGAAA

1728X

yes (45)

 

1

5370C > T

c.5251C > T

R1751X

yes (30)

Germany (1),

1

5382insC

c.5266dupC

1829X

yes (200)

Germany (46), Italy (?), Czech rep. (75), Netherlands (5), Austria (2), Slovakia (2)

8

5496A > T

c.5377A > T

K1793X

no

 

2

Ex1-2del

Ex1-2del

 

no

Germany (?),Czech (1) Canada, Spain

1

Ex5-10 del

Ex5-10 del

 

no

 

3

Ex5-8 del

Ex5-8 del

 

no

 

1

Ex5-7 del

Ex5-7 del

 

no

Spain, Germany

2

Total BRCA1

    

68

  1. Description of nucleotide variations is in accordance with *BIC nomenclature (DNA variants are numerated according to NCBI reference sequence HSU14680 for mRNA of BRCA1; the first nucleotide of mRNA is numerated as 1) or **HGVS nomenclature (DNA variants are numerated according to NCBI reference sequence NM_007294.2 for BRCA1; the first nucleotide of the start codon ATG is numerated as 1).
  2. *** References: Spain [23, 44]. Czech Rep [16, 45]. Germany [15, 46]. Italy [15]. Netherlands [17]. Austria [24]. Slovakia [47]. Canada [48].