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Table 6 PRDX6 SNPs thought to be miRNA target sites

From: Novel variants in the PRDX6 Gene and the risk of Acute Lung Injury following major trauma

SNP ID

Chromosome Position

Base Change

Ancestral

Derived

miRNA

rs4611

171723640

T/C

TTGGTGCT

  
    

CTGGTGCT

 

rs15268

171723695

C/A

 

AGCAATTA

hsa-miR-302f

    

ATTACATA

hsa-miR-380

rs3211528

171724201

G/A

CTGGGGGA

 

hsa-miR-361-3p

rs36005931

171724224

A/G

 

GTGCCTTC

 
    

TGTGCCTT

 

rs35820016

171724277

T/A

TTTTGCTA

 

hsa-miR-548p

    

TTGCAATA

 

rs1804053

171724351

G/A

 

ATGTAGCA

hsa-miR-221

     

hsa-miR-222

rs11544001

171724433

A/G

 

GTGCATGA

 
    

TGCATGAA

 
    

TGTGCATG

 

rs2000

171724457

G/A

AGAGAAGA

 

hsa-miR-942

  1. *miRNA target site modeling was performed using Patrocles.