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Table 3 Genotype and Haplotype frequencies for ERAP2, MTHFR, and COMT for African American samples.

From: Fetal ERAP2 variation is associated with preeclampsia in African Americans in a case-control study

    

Minor Allele Frequency

Group

Gene

SNP/Haplotype

Minor Allele

Pennsylvania

Michigan

Maternal

ERAP2

rs2549782

G

0.397

0.374

 

MTHFR

rs1801133

T

0.112

0.102

 

COMT

rs6269

G

0.393

0.384

  

rs4633

T

0.292

0.316

  

rs4818

G

0.200

0.215

  

rs4680

A

0.276

0.291

  

ATCA

 

0.249

0.270

  

GCCA

 

0.027

0.021

  

GCGG

 

0.163

0.169

  

ACGG

 

0.037

0.048

  

ATCG

 

0.043

0.045

  

GCCG

 

0.203

0.194

  

ACCG

 

0.278

0.253

Fetal

ERAP2

rs2549782

G

0.359

0.424

 

MTHFR

rs1801133

T

0.120

0.133

 

COMT

rs6269

G

0.408

0.425

  

rs4633

T

0.319

0.300

  

rs4818

G

0.214

0.167

  

rs4680

A

0.292

0.308

  

ATCA

 

0.267

0.257

  

GCCA

 

0.022

0.051

  

GCGG

 

0.175

0.139

  

ACGG

 

0.040

0.028

  

ATCG

 

0.049

0.043

  

GCCG

 

0.207

0.235

  

ACCG

 

0.240

0.247

  1. African American samples originated from two locations: the University of Pennsylvania Medical Center, PA and Hutzel Women's Hospital, MI. Minor allele frequencies and haplotype frequencies were calculated from control samples only at each location. When comparing locations, no test achieved a significant difference at the 5% level using a Z-test for differences in two independent proportions. SNP, single nucleotide polymorphism. COMT single SNP frequencies are listed first, followed by COMT haplotypes formed by those SNPs. COMT haplotype SNP order: rs6269, rs4633, rs4818, rs4680.