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Table 1 Overview of the qPCR markers results

From: SNPs and real-time quantitative PCR method for constitutional allelic copy number determination, the VPREB1 marker case

Patients

No.

22q11.2 region qPCR markers results (ΔKCt)

  

D22S181

PRODH

TUPLE1

COMT

D22S936

VPREB1

Not deleted

88

0.007 ± 0.123

-0.009 ± 0.006

-0.018 ± 0.076

0.039 ± 0.009

-0.002 ± 0.062

0.082 ± 0.008

22q11.2

hemideletion

6

-0.004 ± 0.140

-0.982 ± 0.039

-1.076 ± 0.014

-0.958 ± 0.154

-0.887 ± 0.047

0.080 ± 0.024

Patient no.4

1

0.106 ± 0.014

-0.992 ± 0.025

-1.037 ± 0.069

-0.994 ± 0.104

-0.918 ± 0.001

-1.050 ± 0.186

VPREB1 hemideletion

5

0.067 ± 0.087

0.005 ± 0.098

0.038 ± 0.095

0.005 ± 0.115

0.020 ± 0.110

-1.093 ± 0.042

  1. Data are expressed as the mean ΔKCt ± standard deviation calculated on all the subjects of each patients set. ΔKCt consistent with a loss of one allelic copy are indicated in bold.