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Table 2 Genotype characteristics of cases and controls.

From: The role of the fat mass and obesity associated gene (FTO) in breast cancer risk

SNP

Genotype

Cases N = 354

n (%)

Controls N = 364

n (%)

p-value

rs9939609

AA (c)

129 (42.7)

136 (38.9)

0.92

 

AT (h)

124 (41.1)

161 (46.1)

 
 

TT (r)

49 (16.2)

52 (14.8)

 

rs1477196

AA (c)

123 (39.5)

164 (45.8)

0.91

 

AG (h)

130 (41.8)

154 (43.0)

 
 

GG (r)

58 (18.6)

40 (11.2)

 

rs7206790

CC (c)

102 (32.4)

121 (33.8)

0.38

 

CG (h)

142 (45.1)

163 (45.5)

 
 

GG (r)

71 (22.5)

74 (20.7)

 

rs8047395

AA (c)

89 (28.8)

101 (28.5)

0.86

 

AG (h)

140 (45.3)

172 (48.5)

 
 

GG (r)

80 (25.9)

82 (23.1)

 
  1. The p-value is for testing the deviation from Hardy-Weinberg equilibrium (HWE) among controls.
  2. The notation c, h, and r represent common homozygote, heterozygote, and rare homozygote, respectively.