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Table 4 Haplotype frequencies in PD cases and controls

From: Association of Nrf2-encoding NFE2L2 haplotypes with Parkinson's disease

Haplotypes1 Swedish material Polish material
  Parkinson Control Parkinson Control
NFE2L2 tag SNPs 2-6     
   AGGAG 26.2% 30.6% 33.9% 28.2%
   AAGAG 22.2% 22.0% 20.5% 20.5%
   GAAAA 21.5% 26.7% 18.4% 27.7%
   GAGGG 10.9% 5.5% 9.7% 9.6%
   GAGAA 10.2% 9.1% 9.9% 7.1%
   GAAAG 5.4% 1.7% 1.4% 2.5%
NFE2L2 promoter P1-P3     
   AGC 47.5% 47.0% 40.8% 48.1%
   GGC 27.2% 31.2% 33.8% 27.0%
   AAC 12.6% 13.8% 12.3% 12.3%
   AGA 12.6% 7.9% 13.1% 12.6%
KEAP1 tag SNPs 1-3     
   TGC 55.8% 52.7% --- ---
   TGG 26.1% 27.7% --- ---
   CGG 11.0% 12.0% --- ---
   TTC 6.7% 7.4% --- ---
  1. Data are presented for haplotypes with frequencies ≥ 5.0% estimated with the EM-algorithm.1For rs-numbers see table 2.