Table 5 Haplotype associations (only significant associations are shown)
Haplotype Block | Frequency | P Value | Odds Ratio (case, control) | 95% CI |
|---|---|---|---|---|
TFAP2A-rs537112, rs533558, rs303050, rs3798694, and rs3798691 in Hispanic | ||||
AGCGC | 0.133 | 0.0205 | 1.73 (63.0 : 335.0, 29.0 : 267.0) | 1.08-2.77 |
GATGG | 0.516 | 0.2019 | 0.82 (197.0 : 201.0, 161.0 : 135.0) | 0.61-1.11 |
GGTGG | 0.201 | 0.8135 | 0.96 (78.9 : 319.1, 60.8 : 235.2) | 0.66-1.39 |
GGCAG | 0.058 | 0.4974 | 1.26 (25.0 : 373.0, 15.0 : 281.0) | 0.65-2.43 |
AGCGG | 0.041 | 0.3207 | 0.69 (13.9 : 384.1, 14.8 : 281.2) | 0.33-1.45 |
GGCGG | 0.028 | 0.6568 | 0.81 (10.1 : 387.9, 9.2 : 286.8) | 0.33-2.00 |
AGTGG | 0.021 | 0.9639 | 0.97 (8.1 : 389.9, 6.2 : 289.8) | 0.34-2.79 |
EP300- rs17002284, rs4822006, rs4820428 and rs4820429 in non-Hispanic white | ||||
ACGG | 0.503 | 0.0377 | 1.30 (276.0 : 240.0, 229.0 : 259.0) | 1.01-1.67 |
GCAG | 0.245 | 0.1665 | 0.82 (117.0 : 399.0, 129.0 : 359.0) | 0.61-1.09 |
ATAC | 0.163 | 0.054 | 0.72 (73.0 : 443.0, 91.0 : 397.0) | 0.51-1.00 |
ATAG | 0.072 | 0.8074 | 1.06 (38.0 : 478.0, 34.0 : 454.0) | 0.66-1.72 |
ACAG | 0.015 | 0.2348 | 1.91 (10.0 : 506.0, 5.0 : 483.0) | 0.65-5.63 |