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Table 4 Allelic association analysis for the D7S0338i marker using Fisher's exact test

From: Genome wide screen identifies microsatellite markers associated with acute adverse effects following radiotherapy in cancer patients

 

1stscreen

2ndscreen

Overall results

Allele (bp)

LGG n(%)

HGG n(%)

Pvalue

LGG n(%)

HGG n(%)

Pvalue

LGG n(%)

HGG n(%)

Pvalue

278

0 (0.0)

1 (0.6)

1.000

1 (0.6)

1 (0.6)

1.000

1 (0.3)

2 (0.6)

1.000

282

0 (0.0)

0 (0.0)

1.000

1 (0.6)

1 (0.6)

1.000

1 (0.3)

1 (0.3)

1.000

284

1 (0.6)

0 (0.0)

0.494

0 (0.0)

0 (0.0)

1.000

1 (0.3)

0 (0.0)

0.496

288

1 (0.6)

1 (0.6)

1.000

0 (0.0)

1 (0.6)

1.000

1(0.3)

2 (0.6)

1.000

290

0 (0.0)

1 (0.6)

1.000

0 (0.0)

0 (0.0)

1.000

0 (0.0)

1 (0.3)

1.000

292

88 (50.0)

68 (37.8)

0.025

79 (44.4)

58 (32.2)

0.022

167 (47.2)

126 (35.0)

0.001

294

37 (21.0)

39 (21.7)

0.898

45 (25.3)

37 (20.6)

0.315

82 (23.2)

76 (21.1)

0.529

296

44 (25.0)

68 (37.8)

0.012

47 (26.4)

81 (45.0)

2.70E-04

91 (25.7)

149 (41.4)

1.24E-05

298

4 (2.3)

1 (0.6)

0.211

4 (2.2)

1 (0.6)

0.214

8 (2.3)

2 (0.6)

0.062

300

0 (0.0)

1 (0.6)

1.000

0 (0.0)

0 (0.0)

1.000

0 (0.0)

1 (0.3)

1.000

302

1 (0.6)

0 (0.0)

0.494

1 (0.6)

0 (0.0)

0.497

2 (0.6)

0 (0.0)

0.245