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Table 1 NOS2A htSNP gene position, minor allele frequencies (MAF), successful genotype call rates and Hardy-Weinberg equilibrium p-values (HWE P) in Malawi IPD cases and controls

From: Nitric oxide synthase 2A (NOS2A) polymorphisms are not associated with invasive pneumococcal disease

Reference SNP Position Nucleotide substitution MAF case MAF control Call rate HWE P
rs8078340 5' near gene G>A 0.27 0.24 0.97 0.13
rs2779248 5' near gene T>C 0.46 0.45 0.99 0.70
rs16966563 Exon 4 Pro68Pro T>C 0.26 0.26 0.97 0.95
rs3794763 Intron 5 G>A 0.27 0.27 0.98 0.43
rs1137933 Exon 10 Asp385Asp C>T 0.14 0.17 0.97 0.85
rs17718148 Intron 11 C>T 0.13 0.16 0.98 0.45
rs4796052 Intron 11 C>T 0.20 0.21 0.98 0.83
rs2297518 Exon 16 Leu608Ser G>A 0.25 0.25 0.33 0.36
rs2314809 Intron 17 T>C 0.39 0.38 0.97 0.61
rs2297512 Intron 20 A>G 0.16 0.16 0.97 0.92