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Table 5 LXR genotypes in the Swedish population based SDPP cohort

From: Functional and genetic analysis in type 2 diabetes of Liver X receptor alleles – a cohort study

SNP Allelea #11b #12 #22 %11 %12 %22 %1c %2 call rate % HWE
P valued
LXRA
rs4752822 T>C 570 605 157 43 45 12 66 34 99 0.91
rs61896015 C>A 886 377 47 68 29 4 82 18 97 0.42
rs12221497 G>A 902 370 47 68 28 4 82 18 98 0.27
rs2279239 T>C 559 590 151 43 45 12 66 34 97 0.86
rs2279238 C>T 923 360 35 70 27 3 84 16 98 1.00
LXRB
rs35463555 G>A 612 576 140 46 43 11 68 32 99 0.86
rs17373080 C>G 613 578 137 46 43 11 68 32 99 1.00
rs2248949 C>T 426 607 267 33 47 20 56 44 97 0.07
  1. a) Common allele is written first. b) #11 = number of subjects homozygous for common allele, #12 = number of heterozygous subjects, #22 = number of subjects homozygous for rare allele. c) Major allele frequency. d) HWE P values were calculated in HAPLOVIEW [32].