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Table 2 Allele counts and allele frequencies for polymorphisms D6S1276 and rs921126 in CCC1, CCC2, and the combined case-control cohort

From: Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis

Marker

Allele

Repeat

Allele Counts (%)

   

CCC1

CCC2

Combined Cohort

Total Chromosomes

   

Cases

Controls

Cases

Controls

Cases

Controls

 

D6S1276

A

(TCTA)3

0 (0.0)

1 (0.2)

0 (0.0)

0 (0.0)

0 (0.0)

1 (0.1)

1 (0.0)

 

B

(TCTA)5

0 (0.0)

0 (0.0)

1 (0.1)

0 (0.0)

1 (0.1)

0 (0.0)

1 (0.0)

 

C

(TCTA)6

1 (0.4)

0 (0.0)

1 (0.1)

2 (0.2)

2 (0.1)

2 (0.1)

4 (0.1)

 

D

(TCTA)7

2 (0.8)

15 (3.5)

34 (2.8)

45 (4.0)

36 (2.5)

60 (3.9)

96 (3.2)

 

E

(TCTA)8

66 (26.0)

73 (17.2)

264 (21.9)

238 (21.4)

330 (22.6)

311 (20.2)

641 (21.4)

 

F

(TCTA)9

41 (16.1)

83 (19.6)

241 (20.0)

200 (18.0)

282 (19.3)

283 (18.4)

565 (18.9)

 

G

(TCTA)10

106 (41.7)

189 (44.6)

497 (40.3)

450 (40.5)

603 (41.4)

639 (41.6)

1242 (41.5)

 

H

(TCTA)11

38 (15.0)

56 (13.2)

156 (13.0)

157 (14.1)

194 (13.3)

213 (13.9)

407 (13.6)

 

I

(TCTA)12

0 (0.0)

7 (1.7)

7 (0.6)

17 (1.5)

7 (0.5)

24 (1.6)

31 (1.0)

 

J

(TCTA)13

0 (0.0)

0 (0.0)

2 (0.2)

3 (0.3)

2 (0.1)

3 (0.2)

5 (0.2)

 

K

(TCTA)15

0 (0.0)

0 (0.0)

1 (0.1)

0 (0.0)

1 (0.1)

0 (0.0)

1 (0.0)

rs921126

A

----

81 (27.9)

87 (20.2)

333 (26.9)

272 (24.3)

414 (27.1)

359 (23.1)

773 (25.1)

 

G

----

209 (72.1)

343 (79.8)

907 (73.1)

846 (75.7)

1116 (72.9)

1189 (76.9)

2305 (74.9)