|
Haplotype a
|
# controls
|
freq
|
# cases(TS)
|
freq
|
p-value
|
CLR:OR (95%CI)
|
# controls
|
freq
|
# cases(TT)
|
freq
|
p-value
|
CLR:OR (95%CI)
|
|---|
|
AGGTAGTAC
|
215
|
0.35
|
195
|
0.34
|
-
|
reference
|
162
|
0.35
|
152
|
0.36
|
-
|
reference
|
|
GAATATTAC
|
79
|
0.13
|
108
|
0.19
|
0.061
|
1.42 (0.98, 2.04)
|
55
|
0.12
|
75
|
0.18
|
0.150
|
1.38 (0.89, 2.13)
|
|
AGGTATTAC
|
64
|
0.10
|
38
|
0.07
|
0.037
|
0.59 (0.36, 0.97)
|
49
|
0.11
|
32
|
0.08
|
0.113
|
0.62 (0.35, 1.12)
|
|
GAATAGTAC
|
50
|
0.08
|
51
|
0.09
|
0.453
|
1.20 (0.75, 1.90)
|
38
|
0.08
|
35
|
0.08
|
0.553
|
1.19 (0.68, 2.08)
|
|
GGGTAGTAC
|
50
|
0.08
|
42
|
0.07
|
0.829
|
0.94 (0.57, 1.58)
|
33
|
0.07
|
28
|
0.07
|
0.489
|
0.79 (0.41, 1.53)
|
|
GGATATTAC
|
39
|
0.06
|
23
|
0.04
|
0.127
|
0.62 (0.34, 1.15)
|
26
|
0.06
|
20
|
0.05
|
0.420
|
0.75 (0.38, 1.50)
|
|
AGGTTTTAA
|
33
|
0.05
|
23
|
0.04
|
0.323
|
0.74 (0.40, 1.35)
|
28
|
0.06
|
16
|
0.04
|
0.067
|
0.50 (0.24, 1.05)
|
|
AGGCAGTAC
|
23
|
0.04
|
26
|
0.05
|
0.597
|
1.18 (0.63, 2.22)
|
19
|
0.04
|
20
|
0.05
|
0.984
|
1.01 (0.49, 2.06)
|
|
GGACAGTAC
|
26
|
0.04
|
17
|
0.03
|
0.356
|
0.73 (0.38, 1.42)
|
20
|
0.04
|
13
|
0.03
|
0.469
|
0.75 (0.35, 1.62)
|
|
AGGCATTAC
|
26
|
0.04
|
30
|
0.05
|
0.229
|
1.48 (0.78, 2.80)
|
17
|
0.04
|
22
|
0.05
|
0.286
|
1.50 (0.71, 3.15)
|
|
GAATTTTAA
|
14
|
0.02
|
18
|
0.03
|
0.413
|
1.39 (0.63, 3.03)
|
12
|
0.03
|
10
|
0.02
|
0.892
|
0.93 (0.35, 2.49)
|
|
others
|
145
|
0.23
|
157
|
0.27
|
-
|
-
|
97
|
0.21
|
115
|
0.27
|
-
|
-
|
-
a Haplotype configuration: AFP+8865, AFM+1666, AFM+4530, AFM+15790, IL8-251, IL8+396, IL8+37674, IL8+39739, IL8+40050. Others refers to population haplotypes of <10% frequency.
