Table 2 List of differentially methylated CpG positions between the two groups
From: DNA methylation profiles of elderly individuals subjected to indentured childhood labor and trauma
CpG number | Chromosome | Gene symbol | p-value | FDR | CpG site location within the gene |
|---|---|---|---|---|---|
cg09426383 | 7 | SKAP2 | 1.32 × 10−7 | 0.035 | Body |
cg21852117 | 7 | 3.57 × 10−7 | 0.035 | Intergenic | |
cg09303678 | 16 | C16orf11 | 4.05 × 10−7 | 0.035 | TSS1500 |
cg20436912 | 22 | SEC14L4 | 4.32 × 10−7 | 0.035 | TSS1500 |
cg24377150 | 1 | SKI | 4.51 × 10−7 | 0.035 | Body |
cg22718696 | 1 | MTOR | 4.63 × 10−7 | 0.035 | Body |
cg02500267 | 20 | DTD1 | 7.45 × 10−7 | 0.045 | TSS200 |
cg19216792 | 7 | SKAP2 | 8.55 × 10−7 | 0.045 | Body |
cg17256234 | 11 | 9.01 × 10−7 | 0.045 | Intergenic | |
cg00325149 | 1 | COL11A1 | 1.11 × 10−6 | 0.047 | TSS200 |
cg12140851 | 7 | SKAP2 | 1.34 × 10−6 | 0.047 | Body |
cg09997372 | 17 | CSHL1 | 1.65 × 10−6 | 0.047 | TSS1500 |
cg03126199 | 19 | ZNF486 | 1.66 × 10−6 | 0.047 | TSS1500 |
cg26437522 | 7 | 1.87 × 10−6 | 0.047 | Intergenic | |
cg14954143 | 3 | 1.91 × 10−6 | 0.047 | Intergenic | |
cg12252069 | 7 | SKAP2 | 1.96 × 10−6 | 0.047 | Body |
cg22519265 | 17 | ATP2A3 | 2.06 × 10−6 | 0.047 | 5’UTR |
cg22324029 | 6 | HLA-DMB | 2.22 × 10−6 | 0.047 | Body |
cg14895646 | 19 | MED25 | 2.26 × 10−6 | 0.047 | TSS200 |
cg25121513 | 7 | 2.28 × 10−6 | 0.047 | Intergenic | |
cg10993074 | 6 | C6orf47 | 2.37 × 10−6 | 0.047 | 1st Exon |
cg19313023 | 4 | 2.44 × 10−6 | 0.047 | Intergenic | |
cg19395289 | 6 | 2.53 × 10−6 | 0.047 | Intergenic | |
cg23595621 | 14 | RNASE6 | 2.64 × 10−6 | 0.047 | Body |
cg18423591 | 15 | SHF | 2.72 × 10−6 | 0.047 | TSS1500 |
cg10313047 | 3 | DNAH1 | 2.76 × 10−6 | 0.047 | 5’UTR |
cg12074024 | 1 | 2.79 × 10−6 | 0.047 | Intergenic | |
cg16669619 | 18 | 3.33 × 10−6 | 0.047 | Intergenic | |
cg11923320 | 1 | 3.46 × 10−6 | 0.047 | Intergenic | |
cg06793062 | 16 | CNTNAP4 | 3.53 × 10−6 | 0.047 | Body |
cg11068049 | 4 | 3.58 × 10−6 | 0.047 | Intergenic | |
cg07424912 | 16 | SLC38A7 | 3.68 × 10−6 | 0.047 | TSS1500 |
cg00150025 | 15 | PLA2G4F | 3.74 × 10−6 | 0.047 | Body |
cg00292312 | 1 | CAMTA1 | 3.79 × 10−6 | 0.047 | Body |
cg01909551 | 3 | 3.88 × 10−6 | 0.047 | Intergenic | |
cg18708013 | 6 | ZC3H12D | 3.89 × 10−6 | 0.047 | 5’UTR |
cg15641398 | 7 | 3.95 × 10−6 | 0.047 | Intergenic | |
cg04910277 | 8 | DLGAP2 | 4.05 × 10−6 | 0.047 | Body |
cg06226516 | 7 | 4.07 × 10−6 | 0.047 | Intergenic | |
cg18431765 | 2 | 4.25 × 10−6 | 0.047 | Intergenic | |
cg09168222 | 4 | HERC6 | 4.25 × 10−6 | 0.047 | TSS200 |
cg05941631 | 2 | 4.55 × 10−6 | 0.048 | Intergenic | |
cg14889079 | 19 | NDUFA3 | 4.65 × 10−6 | 0.048 | TSS200 |
cg23196756 | 10 | EIF4EBP2 | 4.96 × 10−6 | 0.048 | Body |
cg21054842 | 4 | 5.09 × 10−6 | 0.048 | Intergenic | |
cg00884805 | 1 | GNG12 | 5.13 × 10−6 | 0.048 | 5’UTR |
cg01833485 | 1 | ESRRG | 5.14 × 10−6 | 0.048 | 5’UTR |
cg01409163 | 8 | ERICH1 | 5.35 × 10−6 | 0.048 | Body |
cg08101977 | 16 | CACNA1H | 5.44 × 10−6 | 0.048 | Body |
cg22026150 | 8 | 5.47 × 10−6 | 0.048 | Intergenic | |
cg23385732 | 14 | 5.69 × 10−6 | 0.048 | Intergenic | |
cg11891395 | 7 | DLX5 | 5.72 × 10−6 | 0.048 | Body |
cg24954668 | 7 | 5.72 × 10−6 | 0.048 | Intergenic | |
cg22727965 | 7 | 5.77 × 10−6 | 0.048 | Intergenic | |
cg24378250 | 11 | TAF10 | 5.88 × 10−6 | 0.049 | Body |
cg14740251 | 19 | 6.32 × 10−6 | 0.049 | Intergenic | |
cg05717473 | 6 | 6.52 × 10−6 | 0.049 | Intergenic | |
cg23012579 | 5 | ERGIC1 | 6.65 × 10−6 | 0.049 | Body |
cg02388718 | 9 | NCRNA00032 | 6.7 × 10−6 | 0.049 | Body |
cg07936950 | 2 | DLX1 | 6.72 × 10−6 | 0.049 | 3’UTR |
cg00169412 | 6 | 6.78 × 10−6 | 0.049 | Intergenic | |
cg03730533 | 7 | SKAP2 | 6.9 × 10−6 | 0.049 | Body |
cg13432339 | 4 | 7.05 × 10−6 | 0.049 | Intergenic | |
cg11782208 | 1 | C1orf170 | 7.15 × 10−6 | 0.049 | TSS1500 |
cg11014810 | 10 | SH3PXD2A | 7.25 × 10−6 | 0.049 | Body |
cg11673092 | 10 | ARMC3 | 7.31 × 10−6 | 0.049 | TSS1500 |
cg01573140 | 7 | OGDH | 7.32 × 10−6 | 0.049 | Body |
cg02013146 | 16 | ANKRD11 | 7.33 × 10−6 | 0.049 | 5’UTR |
cg19975800 | 2 | UGT1A10 | 7.48 × 10−6 | 0.049 | TSS200 |
cg16270079 | 3 | PLXNB1 | 7.75 × 10−6 | 0.049 | Body |
cg18703601 | 3 | ROBO1 | 7.82 × 10−6 | 0.049 | TSS1500 |