SNP ID | Minor allele | South Africans this study (n=464) | YRI HapMap (n=226) | CEU HapMap (n=226) | HCB HapMap (n=86) | Bushman dbSNP (n=3) |
---|---|---|---|---|---|---|
NR1I2 rs3732356T>G | G | 0.234 | 0.254 | 0.033** | N/A | 0.000** |
NR1I2 rs2472677C>T | T | 0.351 | 0.356 | 0.636** | 0.544* | N/A |
NR1I2 rs6785049G>A | A | 0.040 | 0.000** | 0.673** | 0.453** | N/A |
NR1I3 rs2307424C>T | T | 0.047 | 0.119** | 0.336** | 0.512** | N/A |
NR1I3 rs3003596T>C | C | 0.416 | 0.612** | 0.407 | 0.535 | 0.500 |
NR1I3 rs2502815C>T | T | 0.230 | 0.406** | 0.248 | 0.442** | 0.500** |
 |  | n=32 # | n=226 | n=226 | n=86 |  |
NR1I2 rs12721601T>C | C | 0.016 | 0.008 | N/A | N/A | N/A |
NR1I2 rs59371185G>A | A | 0.016 | 0.000 | N/A | N/A | N/A |
NR1I2 rs12721613C>T | T | 0.064 | 0.183* | 0.000* | 0.000* | N/A |
NR1I2 rs1464603C>T | T | 0.016 | N/A | 0.292** | 0.325** | 0.000 |
NR1I2 rs1464602C>T | T | 0.313 | 0.186* | 0.717** | 0.675** | 0.667** |
NR1I2 rs80320762G>A | A | 0.048 | 0.144* | N/A | N/A | N/A |
NR1I2 rs12721616C>T | T | 0.219 | 0.042** | N/A | N/A | N/A |
NR1I2 rs112813596G>A | A | 0.016 | N/A | N/A | N/A | 0.000 |
NR1I3 rs35205211C>G | G | 0.032 | N/A | N/A | N/A | 0.005 |
NR1I3 rs34161743C>T | T | 0.016 | N/A | N/A | N/A | 0.005 |
NR1I2 36726T>C# | C | 0.078 | N/A | N/A | N/A | N/A |
NR1I2 36857G>A# | A | 0.016 | N/A | N/A | N/A | N/A |
NR1I2 36905C>T# | T | 0.031 | N/A | N/A | N/A | N/A |